conference
adaptive-dynamics
warning-signals
- Friday 09 Dec 2011
- Wednesday - wrightscape runs and various other things 07 Dec 2011
- Tuesday -- two insights 06 Dec 2011
- Wednesday - various logistics, then checking likelihood calculation 30 Nov 2011
- Friday 18 Nov 2011
- Crashing stocks and optimal harvesting effort on Allee effects 09 Nov 2011
- Warning signals - noise response 03 Nov 2011
- Optimal Control examples continued: Bellman, Dynamic Programming 28 Oct 2011
- Friday: Optimal Control 21 Oct 2011
- Rewrites 17 Oct 2011
- Friday, more runs 17 Oct 2011
- Wednesday 12 Oct 2011
- Wednesday - forage fish & cascades 05 Oct 2011
- Van Kampen Expansion and Stochastic population dynamics 21 Sep 2011
- Monday 19 Sep 2011
- pdg-control pdg-control, Tuesday 13 Sep 2011
- Pretty Darn Good Control Working Group 12 Sep 2011
- Wednesday 07 Sep 2011
- Thursday Reading 01 Sep 2011
- Wednesday 31 Aug 2011
- Tuesday 30 Aug 2011
- ESA Tuesday 09 Aug 2011
- Monday: ESA Conference 08 Aug 2011
- Fisheries stock assessments for early warning 02 Aug 2011
- Monday 02 Aug 2011
- Saturday: Fisheries Data Survey, Warning Signals 30 Jul 2011
- Friday: ESA Practice Talk 29 Jul 2011
- Weds: Manuscript 27 Jul 2011
- Wednesday: ESA presentation, manuscript/appendix edits 27 Jul 2011
- Tues: ESA presentation 26 Jul 2011
- Monday: ESA, appendix, etc 25 Jul 2011
- Sunday: Appendix edits 24 Jul 2011
- Sunday: Warning Signals 17 Jul 2011
- Saturday - back to Warning Signals MS 17 Jul 2011
- Thursday: sending off paper draft, starting applications 07 Jul 2011
- Early warning signals presentation notes 07 Jul 2011
- Exact Simulation by the Gillespie Algorithm 06 Jul 2011
- Wednesday: Data wrangling into graphs 06 Jul 2011
- Tuesday: Warning Signals Data Wrangling 05 Jul 2011
- Warning Signals writing, organization, appendices 04 Jul 2011
- Friday, warning signals writing, etc 01 Jul 2011
- Thursday: Warning Signals writing, figures, segue 30 Jun 2011
- Warning signals: summary statistic performance at varying sampling effort 29 Jun 2011
- Warning Signals writing 29 Jun 2011
- Monday: Warning Signals Manuscript 27 Jun 2011
- Sunday 12 Jun 2011
- Friday 10 Jun 2011
- Sunday -- warning signals manuscript (mostly) 05 Jun 2011
- Thursday: Warning Signals 02 Jun 2011
- Warning Signals Literature: when stats are and aren't attempted 01 Jun 2011
- Thursday Meetings: Duncan; Alan 26 May 2011
- Wednesday 25 May 2011
- Tuesday 24 May 2011
- Monday 03 May 2011
- Early Warning Signals in Coral Dynamics -- Economic analysis of risk 19 Apr 2011
- Thursday: submitting warning signals manuscript 18 Apr 2011
- Weds: Final round edits 13 Apr 2011
- Tuesday: manuscript and appendix edits 12 Apr 2011
- Monday: Warning Signals - Updated graphs 11 Apr 2011
- Sunday: Warning signals edits continue 11 Apr 2011
- Warning signals 08 Apr 2011
- Warning Signals - Manuscript touch-ups 06 Apr 2011
- Thursday finishing up appendices(?) 01 Apr 2011
- Wednesday: appendices; parameter distributions 30 Mar 2011
- Tuesday, simulations & appendix 29 Mar 2011
- Monday, appendices continue... 29 Mar 2011
- Sunday -- edits and appendices 27 Mar 2011
- Saturday-- Appendices 26 Mar 2011
- Friday 25 Mar 2011
- Thursday 24 Mar 2011
- Wednesday 23 Mar 2011
- Tuesday: Figures, figures, figures 23 Mar 2011
- Monday -- Edits and organization 22 Mar 2011
- Sunday - manuscript and simulations 21 Mar 2011
- Writing: Warning Signals Mansucript 20 Mar 2011
- Warning Signals examples and tracking graphs 19 Mar 2011
- Warning Signals in Ecological Systems: Revisions and Drake & Griffen Data 17 Mar 2011
- Wednesday 16 Mar 2011
- Tuesday 15 Mar 2011
- Warning Signals, Monday 14 Mar 2011
- Warning signals: summary stats vs likelihood on real and simulated data 11 Mar 2011
- Numerical challenges in likelihood estimation of time-dep OU models 10 Mar 2011
- Warning Signals data examples 09 Mar 2011
- Warning Signals: Comparing Methods on Climate Data 01 Mar 2011
- Warning Signals on Real data continued 28 Feb 2011
- Warning Signals on Real Data? 27 Feb 2011
- ESA 2011 Abstract: Limits to Detection of Early Warning Signals 23 Feb 2011
- Weds & Framing warning signals manuscript 16 Feb 2011
- Monday 14 Feb 2011
- Warning signals & hpc 04 Feb 2011
- Progress on warning signals 03 Feb 2011
- Warning signals: Indicators vs Likelihood continued 31 Jan 2011
- Warning signals of differing stregths by likelihood and by indicator 28 Jan 2011
- Warning signals vs model choice 27 Jan 2011
- Warning Signals, Power and Sufficient Statistics 10 Jan 2011
blog
seminar
notebook-technology
open-science
semantics
delayed-release
- Warning signals - noise response 03 Nov 2011
- Rewrites 17 Oct 2011
- ESA personal notes: people, goals 13 Aug 2011
- Fisheries stock assessments for early warning 02 Aug 2011
- Monday 02 Aug 2011
- Weds: Manuscript 27 Jul 2011
- Monday: ESA, appendix, etc 25 Jul 2011
- Sunday: Appendix edits 24 Jul 2011
- Saturday - back to Warning Signals MS 17 Jul 2011
- Early warning signals presentation notes 07 Jul 2011
- Wednesday: Data wrangling into graphs 06 Jul 2011
- Tuesday: Warning Signals Data Wrangling 05 Jul 2011
- Warning Signals writing, organization, appendices 04 Jul 2011
- Friday, warning signals writing, etc 01 Jul 2011
- Thursday: Warning Signals writing, figures, segue 30 Jun 2011
- Warning signals: summary statistic performance at varying sampling effort 29 Jun 2011
- Warning Signals Literature: when stats are and aren't attempted 01 Jun 2011
- Early Warning Signals in Coral Dynamics -- Economic analysis of risk 19 Apr 2011
- Weds: Final round edits 13 Apr 2011
- Monday: Warning Signals - Updated graphs 11 Apr 2011
- Thursday finishing up appendices(?) 01 Apr 2011
- Wednesday: appendices; parameter distributions 30 Mar 2011
- Saturday-- Appendices 26 Mar 2011
- Tuesday: Figures, figures, figures 23 Mar 2011
- Writing: Warning Signals Mansucript 20 Mar 2011
- Sam's Practice talk 18 Mar 2011
- Warning Signals in Ecological Systems: Revisions and Drake & Griffen Data 17 Mar 2011
algorithms
ropensci
- Monday 12 Dec 2011
- Wednesday - various logistics, then checking likelihood calculation 30 Nov 2011
- Treebase Package On Cran 25 Oct 2011
- Thursday, Fisheries course 13 Oct 2011
- Wednesday 12 Oct 2011
- rfishbase Tutorial - updated & extended 12 Oct 2011
- Friday: ropensci, manuscript edits 23 Sep 2011
- rfishbase demo: Are there more Goby or Labrid species on reefs? 02 Sep 2011
- rropensci and some taxonomy in R with taxize 26 Aug 2011
- FishBASE from R: some XML parsing 26 Aug 2011
- Tuesday: rropensci, Rmpi, manuscripts, ... 23 Aug 2011
- Thursday: reviewing edits, ropensci, computers. 18 Aug 2011
- #ievobio Day 2 22 Jun 2011
- Friday 03 Jun 2011
- Sunday 29 May 2011
- Thursday Meetings: Duncan; Alan 26 May 2011
- Sunday 22 May 2011
- TreeBASE in R: a first tutorial 16 May 2011
- Wednesday: Treebase 11 May 2011
- Interfaces for databases: TreeBASE, Dryad, DataONE 10 May 2011
- Sunday: a few Treebase R package updates 08 May 2011
- treeBASE R interface: proposal for #iEvoBio 03 May 2011
- Accessing phylognenies in TreeBASE from R 26 Apr 2011
- Wednesday 20 Apr 2011
- TreeBase: exploratory exercises in database-driven phylogenetics 08 Apr 2011
pmc
code-tricks
reading
R
education
hpc
research-blogging
progress-summary
pdg-control
colored-noise
coursework
wrightscape