Tags

pdg-control

• Progress Summary 21 Dec 2012
• Notes 05 Dec 2012
• Figures 3 And 4 For Policycosts 03 Dec 2012
• Policy Costs Work 27 Nov 2012
• Notes 22 Nov 2012
• Multiple Uncertainty Value Function Iteration 24 Oct 2012
• Multiple Uncertainty 01 Oct 2012
• Tuesday: pandoc citations notes, various 27 Mar 2012
• Active adaptive management solutions: Belief SDP 26 Mar 2012
• Policy costs to changing mangement, TP 1b: Apples to Apples 21 Mar 2012
• Tuesday: active adaptive management, a first solution 20 Mar 2012
• pdg-control Day 1 goals by training problem 13 Mar 2012
• pdg-control, Training Problem 2 update to group 13 Mar 2012
• Parameter uncertainty in stochastic control problems 11 Mar 2012
• Tuesday 06 Mar 2012
• Monday 05 Mar 2012
• Thursday, Friday, Saturday 03 Mar 2012
• Stochastic optimization 22 Feb 2012
• Monday 30 Jan 2012
• pdg-control Training Problem II update 24 Jan 2012
• Optimal policy with assymetric costs to changing harvest quotas 06 Jan 2012

warning-signals

• Progress Summary 21 Dec 2012
• Random_ews_example 17 Dec 2012
• Notes 17 Oct 2012
• My Prosecutor's Fallacy paper and other recent warning signals literature 10 Oct 2012
• Prosecutors Fallacy 19 Sep 2012
• Notes 23 Aug 2012
• Warning Signals In Management 22 Aug 2012
• Revisions on Prosecutors Fallacy 22 Aug 2012
• Notes 23 Jul 2012
• Notes 21 Jun 2012
• Notes 08 Jun 2012
• Limits to the detection of early warning signals 21 May 2012
• Notes 15 May 2012
• notes 14 May 2012
• Prosecutor's fallacy notes 12 May 2012
• Project tracking (Ecology) 27 Apr 2012
• 2012-04-20 26 Apr 2012
• Catching up 19 Apr 2012
• Monday / Tuesday 10 Apr 2012
• Warning Signals in Fish Collapse 28 Feb 2012
• Monday 27 Feb 2012
• ESA 2012 Abstract 23 Feb 2012
• Tues: Research, seminar (managing for resilience), talk (future of libraries), etc... 21 Feb 2012
• finer sampling in prosecutor's fallacy 20 Feb 2012
• prosecutor's fallacy initial look 16 Feb 2012
• Squiggles 16 Feb 2012
• getting signal from autocorrelation 15 Feb 2012
• Further examples for appendices 14 Feb 2012
• Monday 13 Feb 2012
• Sunday 12 Feb 2012
• Saturday: projects, reading, markdown notebook-technology 12 Feb 2012
• UC Davis graduate student symposium proposal 08 Feb 2012
• Different ways of visualizing distribution overlap 03 Feb 2012
• Tuesday 24 Jan 2012
• Wednesday -- meetings 18 Jan 2012
• Optimal policy with assymetric costs to changing harvest quotas 06 Jan 2012

code-tricks

• Migrating Oww Posts To Jekyll 27 Sep 2012
• Notes 04 Sep 2012
• Catching up 19 Apr 2012
• Friday: some random notes 20 Mar 2012
• Monday 27 Feb 2012
• Thursday: writing; some latexdiff notes 10 Feb 2012
• Monday 30 Jan 2012
• Wednesday -- meetings 18 Jan 2012
• Monday - Sweave workflow 09 Jan 2012

coursework

• Wednesday 22 Feb 2012
• Resilience seminar course plan 10 Jan 2012

blog

• Github Issues Tracker: The Perfect Research Todo List 06 Dec 2012
• Citing Lab Notebook Entries 23 Nov 2012
• Semantic Lab Notebook 14 Oct 2012
• Welcome to my Lab Notebook - Reloaded 28 Sep 2012
• Migrating From Wordpress To Jekyll 19 Sep 2012
• Esa Changes Arxiv Policy Following Community Comments 05 Sep 2012
• knitr, github, and a new phase for the lab notebook 21 Mar 2012
• Citing R packages 20 Mar 2012
• Journey to freedom - a code's tale of open source license migration 31 Jan 2012
• Are open lab notebooks considered prior publication? 16 Jan 2012

ropensci

• Notes 10 May 2012
• 2012-04-20 26 Apr 2012
• Catching up 19 Apr 2012
• Monday / Tuesday 10 Apr 2012
• Friday 06 Apr 2012
• Monday/Tuesday 03 Apr 2012
• Tuesday: pandoc citations notes, various 27 Mar 2012
• Tuesday 06 Mar 2012
• Monday 27 Feb 2012
• Wednesday 22 Feb 2012
• Tues: Research, seminar (managing for resilience), talk (future of libraries), etc... 21 Feb 2012
• Saturday: projects, reading, markdown notebook-technology 12 Feb 2012
• Thursday 02 Feb 2012
• Wednesday -- meetings 18 Jan 2012

my-publications

• My Prosecutor's Fallacy paper and other recent warning signals literature 10 Oct 2012
• Prosecutors Fallacy 19 Sep 2012
• Limits to the detection of early warning signals 21 May 2012
• Is your phylogeny informative? 19 Jan 2012

R

• knitcitations 30 May 2012
• Writing reproducibly in the open with knitr 07 Apr 2012
• Citations in markdown using knitr 24 Mar 2012
• knitr, github, and a new phase for the lab notebook 21 Mar 2012
• Citing R packages 20 Mar 2012
• Elegant & fast data manipulation with data.table 12 Feb 2012
• Is your phylogeny informative? 19 Jan 2012

research-blogging

• Is your phylogeny informative? 19 Jan 2012

notebook-technology

• Learning Jekyll 30 Dec 2012
• Github Issues Tracker: The Perfect Research Todo List 06 Dec 2012
• Note On Notebook Figures 30 Nov 2012
• Citing Lab Notebook Entries 23 Nov 2012
• Better Tagging Practices 09 Nov 2012
• Notes 06 Nov 2012
• Notes 29 Oct 2012
• Semantic Markup Examples For The Lab Notebook 23 Oct 2012
• Semantic Lab Notebook 14 Oct 2012
• Automated feeds in notebook entries 05 Oct 2012
• Solarized Colors with Twitter-Bootstrap? 02 Oct 2012
• Welcome to my Lab Notebook - Reloaded 28 Sep 2012
• Migrating Oww Posts To Jekyll 27 Sep 2012
• Migrating From Wordpress To Jekyll 19 Sep 2012
• Exploring Jekyll layout 26 May 2012
• Testing out a Jekyll-based notebook 03 May 2012
• Notes 03 May 2012
• Jekyll vs Wordpress 01 May 2012
• Catching up 19 Apr 2012
• Saturday: projects, reading, markdown notebook-technology 12 Feb 2012
• Monday 30 Jan 2012

reading

• My Prosecutor's Fallacy paper and other recent warning signals literature 10 Oct 2012
• Notes 23 Jul 2012
• Friday 06 Apr 2012
• Robust control & uncertainty - reading notes 22 Mar 2012
• Parameter uncertainty in stochastic control problems 11 Mar 2012
• Thursday 02 Feb 2012

pmc

• Tues: Research, seminar (managing for resilience), talk (future of libraries), etc... 21 Feb 2012

seminar

• Infering Partially Observable Markov Processes with Iterative Particle Filtering 09 May 2012
• Jordan's bigdata talk in Math/Stats series 05 Apr 2012
• Alex Pfaff seminar, meeting 09 Mar 2012
• Visuals for Communicating Uncertainty 24 Feb 2012
• Tues: Research, seminar (managing for resilience), talk (future of libraries), etc... 21 Feb 2012

workflow

• Monday / Tuesday 10 Apr 2012
• Monday/Tuesday 03 Apr 2012
• Tuesday: pandoc citations notes, various 27 Mar 2012

conference

• Altmetrics Conference 03 Nov 2012
• Esa 2012 Conference 10 Aug 2012
• Csgf Conference 27 Jul 2012
• Evolution and iEvobio conference notes 09 Jul 2012
• Evolution 2012 Conference, Day 1 08 Jul 2012
• Ievobio Lightning Talk Proposal 24 Jun 2012
• Data to Knowledge Day II and other notes 08 May 2012
• Data to Knowledge Day 1 07 May 2012
• Data to Knowledge Conference, UC Berkeley: application 29 Mar 2012

wrightscape

• Catching up 19 Apr 2012
• Monday / Tuesday 10 Apr 2012

decision-theory

• Figures 3 And 4 For Policycosts 03 Dec 2012
• Multiple Uncertainty Corrections 01 Nov 2012
• Multiple Uncertainty Value Function Iteration 24 Oct 2012
• Multiple Uncertainty 01 Oct 2012
• Analytic Solution To Multiple Uncertainty 14 Sep 2012
• Warning Signals In Management 22 Aug 2012
• Deviations from S = D 30 Jul 2012
• Notes 04 Jul 2012
• varying recruitment function, noise form, and harvesting cost 02 Jul 2012
• Progress this week, by project 29 Jun 2012
• Notes on value of information runs with uniform noise 22 Jun 2012
• Notes 21 Jun 2012
• Policy functions and value functions under multiple uncertainty 13 Jun 2012
• Notes 08 Jun 2012
• Value of information, cost of bias 16 May 2012
• Computing the value of information in management of a stochastic resource 11 May 2012
• Stochastic policy costs 02 May 2012
• Additional sources of noise (Sethi 2005) 30 Apr 2012
• Project tracking (Ecology) 27 Apr 2012

Jekyll

• Learning Jekyll 30 Dec 2012
• Automated feeds in notebook entries 05 Oct 2012
• Solarized Colors with Twitter-Bootstrap? 02 Oct 2012
• Welcome to my Lab Notebook - Reloaded 28 Sep 2012
• Migrating Oww Posts To Jekyll 27 Sep 2012
• Migrating From Wordpress To Jekyll 19 Sep 2012
• Exploring Jekyll layout 26 May 2012
• Prosecutor's fallacy notes 12 May 2012
• Testing out a Jekyll-based notebook 03 May 2012
• Notes 03 May 2012
• Jekyll vs Wordpress 01 May 2012

hpc

• Csgf Conference 27 Jul 2012
• Data to Knowledge Day II and other notes 08 May 2012
• Data to Knowledge Day 1 07 May 2012

algorithms

• Infering Partially Observable Markov Processes with Iterative Particle Filtering 09 May 2012

knitcitations

• knitcitations 30 May 2012

multiple-uncertainty

• Progress Summary 21 Dec 2012
• Notes 22 Nov 2012
• Notes 21 Nov 2012
• Multiple uncertainty corrected 16 Nov 2012
• Notes 08 Nov 2012
• Multiple Uncertainty Corrections 01 Nov 2012
• Analytic Solution To Multiple Uncertainty 14 Sep 2012
• Pdg Control Updates 21 Aug 2012
• Policy functions and value functions under multiple uncertainty 13 Jun 2012

Labrids

• wrightscape / release of constraint 03 Jul 2012

nonparametric-bayes

• Notes 27 Dec 2012
• Notes 23 Dec 2012
• Progress Summary 21 Dec 2012
• Results Comparing Gp To Parametric 20 Dec 2012
• Exploring Gp Model Space 19 Dec 2012
• Nonparametric Bayes Comparisons 15 Dec 2012
• Nonparametric Bayes Notes 11 Dec 2012
• Prior Distributions For Tgp Mcmc 10 Dec 2012
• Tgp Mcmc For Gaussian Processes 04 Dec 2012
• early results in nonparametric-bayes approaches to optimal policy 28 Nov 2012
• Sequential Updating 19 Nov 2012
• Notes 15 Nov 2012
• Notes 08 Nov 2012
• Stochastic Dynamic Programming With Gaussian Process Approx 25 Oct 2012
• Gaussian process inference on sample functions 23 Oct 2012
• Comparing numerical methods 22 Oct 2012
• Basic regression in Gaussian processes 17 Oct 2012
• Gaussian processes 16 Oct 2012
• Santa Cruz Postdoc 29 Aug 2012

open-science

• Esa Changes Arxiv Policy Following Community Comments 05 Sep 2012

prosecutor

• Prosecutors Fallacy 19 Sep 2012

delayed-release

• Prosecutors Fallacy 19 Sep 2012

semantics

• Citing Lab Notebook Entries 23 Nov 2012
• Semantic Markup Examples For The Lab Notebook 23 Oct 2012
• Notes 19 Oct 2012
• Semantic Lab Notebook 14 Oct 2012