Publications
- Jeremy M. Beaulieu, Dwueng-Chwuan Jhwueng, Carl Boettiger and Brian O’Meara, (2012). Modeling Stabilizing Selection: Expanding the Ornstein-Uhlenbeck Model of Adaptive Evolution. In Evolution, doi:10.1111/j.1558–5646.2012.01619.x. (pdf) (code)
- Carl Boettiger, Graham Coop, Peter Ralph (2012) Is your phylogeny informative? Measuring the power of comparative methods. In Evolution. doi:10.1111/j.1558–5646.2012.01574.x (pdf) (arXiv) (code) (data)
- Carl Boettiger, Jonathan Dushoff, Joshua S Weitz (2010) Fluctuation domains in adaptive evolution., 6–13. In Theoretical Population Biology 77 (1). doi:10.1016/j.tpb.2009.10.003 (pdf) (arXiv) (code) (data)
- James J. Wray, Neta A. Bahcall, Paul Bode, Carl Boettiger, Phillip Hopkins. (2006) The Shape, Multiplicity, and Evolution of Superclusters in ΛCDM Cosmology, 907–916. In The Astrophysical Journal 652 (2). doi:10.1086/508600 (pdf) (arXiv)
Presentations
- Carl Boettiger & Alan Hastings. (2011) Limits to Detection for Early Warning Signals of Population Collapse. Ecological Society of America Conference; Austin, TX. In Nature Precedings [slides]
- Carl Boettiger. (2011) A general model of continuous character evolution. Evolution Conference; Norman, OK. In Nature Precedings, doi:10.1038/npre.2011.6080.1 [slides]
- Carl Boettiger. (2011) Using Treebase from R. iEvoBio Conference; Norman, OK. In Nature Precedings, doi:10.1038/npre.2012.6851.1 [slides]
- Carl Boettiger. (2011) Integrating Open Lab Notebooks with Online Databases Science Online; Durham, NC. In Nature Precedings, doi:10.1038/npre.2012.6853.1 [slides]
- Carl Boettiger, Graham Coop & Peter Ralph. (2011) Is your phylogeny informative? Presented at the Society for Integrative and Comparative Biology. Salt Lake City, Utah. In Nature Precedings, doi:10.1038/npre.2011.6453.1 [slides]
- Carl Boettiger. (2010) My experiment with open science. At iEvoBio Conference; Portland, OR. In Nature Precedings doi:10.1038/npre.2010.4602.1 [slides]
- Carl Boettiger. (2010) Evolution Conference; Portland OR.
A new phylogenetic comparative method: detecting niches and transitions with continuous characters. In Nature Precedings doi:10.1038/npre.2010.4615.1 [slides] - Carl Boettiger. (2009) Inferring Adaptive Landscapes from Phylogenetic Trees. University of Tennessee, Knoxville, TN.
- Carl Boettiger. (2009) Inferring Adaptive Landscapes from Phylogenetic Trees. Center for Population Biology, Davis, CA. [slides]
- Carl Boettiger. (2009) The Evolutionary Seesaw: Origins of Biodiversity? International Institute of Applied Systems Analysis, Vienna; Austria. In Nature Precedings, doi:10.1038/npre.2012.6852.1 [slides]
- Carl Boettiger. (2008): Reading the Secrets of Biological Fluctuations. Cornell Probability Summer School, Ithaca, NY. In Nature Precedings, doi:10.1038/npre.2010.4949.1 [slides]
Theses
- Carl Boettiger, Stephen Pacala, David Huse (2007) Ensemble Behavior from Individual Dynamics in Multispecies Forest Populations. Princeton Physics Dept. Download PDF (1.16 MB)
- Carl Boettiger, Joshua Weitz, Simon Levin (2007) Adaptive Dynamics: Branching Phenomena and the Canonical Equation. Princeton Physics Dept. Download PDF (775.55 KB)
- Carl Boettiger, David Huse (2006) Clonal Interference Models in Population Genetics. Princeton Physics Dept. Download PDF (368.64 KB)
Software
- Carl Boettiger (2012). pmc: Phylogenetic Monte Carlo. Stable version on CRAN.
- Carl Boettiger & Duncan Temple Lang (2011). treebase: An R interface to TreeBASE. Stable version on CRAN.
- Carl Boettiger (2011). rfishbase: Programmatic access to FishBase. Stable version on CRAN.
See my software page for details.
Media coverage
- Featured in Science Careers